Mô tả công việc
Gene Solutions is a leading company in Vietnam, specializing in the research and development of advanced genetic testing for precision medicine in screening, diagnosis, and treatment of cancer. Over the years, Gene Solutions has consistently invested in building a strong and highly skilled R&D team, with prominent publications in related fields.
Job descriptions
We are seeking a bioinformatician to expand our expertise in bioinformatics data analysis and pipeline development. As a bioinformatician – nextflow developer in our Data team at Gene Solutions, you will be working in a dynamic, interdisciplinary and fast- paced research- oriented environment. You will collaborate closely with data scientists, machine learning engineers, biologists and immunologists to design, develop, implement and optimize bioinformatics pipelines, which use Nextflow, to process and analyze high- throughput next- generation sequencing (NGS) data. Key tasks also include maintaining and improving existing pipelines to ensure that all production pipelines meet optimal standards; such as pipeline performance, scalability, well- written documentation and reproducibility. You will contribute to multiple research projects, requiring not only a strong data management capability, but also excellent personal planning skills. If you are passionate about bioinformatics and eager to apply your expertise in genomic data science research, we strongly encourage you to apply and join our team.
Key Responsibilities
Communicate findings to Data team and R&D team in the form of weekly presentations and reports.
Conduct rigorous exploratory bioinformatics analysis using state- of- the- art methods to explore and extract insights from NGS data. Implement and deploy new bioinformatics pipeline.
Work with large and complex NGS data sets.
Apply and maintain existing bioinformatics data pipelines and optimize them to specific problems depending on the requirement of the research projects.
Responsible for the end- to- end development and deployment of a bioinformatics pipeline, including data pre- processing, data standardization, pipeline deployment on- premises server or cloud- based platforms, simple GUI design (if required, e.g Shiny apps, Flask apps), automation with CI/CD pipeline, data storage management.
Provide bioinformatics support and consultancy for other team members. Maintain close collaboration with a multidisciplinary team throughout the project to ensure a successful delivery of the new bioinformatics pipeline.
